Presentations by Mark Welsh, and myself can be found at SciVee.
Mark presents our poster at ISMB , and I present our work at the “Sequencing, Finishing and Analysis in the Future Meeting,” in Santa Fe.
We also presented at this and last year’s BOSC meetings that were held at ISMB. The abstracts and slides can be found at:
What others are thinking:
Real time commentary on the 2009 BOSC presentation can be found at friendfeed and another post. The Fisheye Perspective considers how HDF5 fits with semantic web tools.
HDF in Bioinformatics:
Check out Fast5 for using HDF5 to store sequences and base probablities.
BioHDF in the News:
Genome Web and Bioinform articles on HDF5 or referencing HDF5 include:
- NHGRI Awards Grant to Geospiza-HDF Collaboration
- Geospiza, HDF Group Snag $1.1M NHGRI Grant to Develop Scalable Data Format for Second-gen Sequencing
- Bioinformatics Pros: Labs Should Include Data Management in All Project Plans
Links to FinchTalks about BioHDF from 2008 t0 present include:
- Part I: Introduction
- Part II: Background
- Part III: The HDF5 Advantage
- Part IV: HDF5 Benefits
- Part V: Why HDF5?
You can learn more about HDF5 and get the software and tools at: